Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | ----MDISIFREYDIRGIYPTTLDENTAFSIGVELGKIMREY-DKSVFVGHDARVHGRFLFEVLSAGLQSSGLKVYDLGLIPTPVAYFAAFNEIDNIQCPNSIMITGSHNPKEYNGFKITLNQNPFYGKDIQALKNTLLNAKHEIKPLKETPEKVNALEAYHRYLIKDFKHLKNLKYKIALDFGNGVGALGLEPILKALNIDFSSLYSDPDGDFPNHHPDPSEAKNLKDLEKHMRENAILIGFAFDGDADRIAMLSSH-HIYAGDELAILFAKRLHAQGITPFVIGEVKCSQVMYNAINTFG-KTLMYKTGHSNLKIKLKETNAHFAAEMSGHIFFKERYFGYDDALYACLRALELLLEQSPSDLENTIKNLPYSYTTPEEKIAVSEEEKFEIIRNLQEALKNPPSHFPTIKEIISIDGVRVVFEHGFGLIRASNTTPYLVSRFEGKDETTALEYKRALLGLLEKL-------- |
1K2Y Chain:X ((5-463)) | KAPTLPASIFRAYDIRGVVGDTLTAETAYWIGRAIGSESLARGEPCVAVGRDGRLSGPELVKQLIQGLVDCGCQVSDVGMVPTPVLYYAANV----LEGKSGVMLTGAHNPPDYNGFKIVVAGETLANEQIQALRERIEK--NDLASGVGSVEQVDILPRYFKQIRDDIAMAKPM--KVVVDCGNGVAGVIAPQLIEALGCSVIPLYCEVDGNFPNHHPDPGKPENLKDLIAKVKAENADLGLAFDGDGDRVGVVTNTGTIIYPDRLLMLFAKDVVSRNPGADIIFDVKCTRRLIALISGYGGRPVMWKTGHSLIKKKMKETGALLAGEMSGHVFFKERWFGFDDGIYSAARLLEILS-QDQRDSEHVFSAFPSDISTPEINITVTEDSKFAIIEALQRDAQWGEG------NITTLDGVRVDYPKGWGLVRASNTTPVLVLRFEADTEEELERIKTVFRNQLKAVDSSLPVPF |
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General information:
TITO was launched using:
| RESULT:
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Template: 1K2Y.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -249675 for 4055 contacts (-61.6/contact) +
2D Compatibility (PS) -48793 + (NN) -32206 + (LL) 976
1D Compatibility (HY) -36000 + (ID) 8850
Total energy: -374548.0 ( -92.37 by residue)
QMean score : 0.523
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