Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MEQEVTRLI--SASKQDFEKMNGRDLKRSIFQSEGRVIMAQHLLFASQG---LVRGVTNTELLAAFGSDMIMLNTFNLEDEKSNLGLQGLTLEDLKKRVNIPLGIYLGCPGENKTSENIIYDAAGMLATDEHLLRAKEIGADFIVLGGNPGSGTSIQDIIETTKRARKLLGNDVLIFAGKW-----EDGIDEKVLGDPLA---KQDAKEVIKQLIDAGADVIDLPAPGSRHG-------ISVRMIQELVQFIHLYKPGTLAMTFLNSS---VEGADQDTIRLIALMMKETGADIHAIGDGGFSGCTTPENVMQLSISLKGKPYTYFRMASRNR--------------------------- |
| 1GVF Chain:A ((2-285)) | -------SIIS--TKYLLQDAQANGYAVPAFNIHNAETIQAILEVCSEMRSPVILAGTPGTFK------------------HIALEEIYALCSAYSTTYNMPLALHLD----HHE--SLDDIRRKVHA-----------GVRSAMIDG---SHFPFAENVKLVKSVVDFCHSQDCSVEAELGRLGS------------AFLTDPQEAKRFVELT----GVDSLAVAIGTAHGLYSKTPKIDFQRLAEIREVV------DVPLVLHGASDVPDEFVRRTIELGVTKVNVATELKIAFAGAVKAWFAENP------------------QGNDPRYYMRVGMDAMKEVVRNKINVCGSANRIS |
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General information:
TITO was launched using:
| RESULT:
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Template: 1GVF.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -69765 for 1748 contacts (-39.9/contact) +
2D Compatibility (PS) -24211 + (NN) -10115 + (LL) 4416
1D Compatibility (HY) -2800 + (ID) 1550
Total energy: -104025.0 ( -59.51 by residue)
QMean score : 0.283
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