Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MIKLGNDWDELLKNEFNQPYYLTLRQFLKKEYQTKKVFPDMYDIFNALKHTAYKDVKVVILGQDPYHGPGQAHGLSFSVQQGVQIPPSLQNIYLELHNDLNCEI-PNNGYLIPWADQGVLLLNTVLTVRAGQANSHRGQGWEILTNHIIEIINQKEEPVVFLLWGSNAKEKLQLLTNPKHTAFTSVHPSPLSASRGFMGCKHFSKTNQFLEQNGVKPIDWQIPSI
3FCI Chain:A ((1-223))
MEFFGESWKKHLSGEFGKPYFIKLMGFVAEERKHYTVYPPPHQVFTWTQMCDIKDVKVVILGQDPYHGPNQAHGLCFSVQRPVPPPPSLENIYKELSTDIEDFVHPGHGDLSGWAKQGVLLLNAVLTVRAHQANSHKERGWEQFTDAVVSWLNQNSNGLVFLLWGSYAQKKGSAIDRKRHHVLQTAHPSPLSVYRGFFGCRHFSKTNELLQKSGKKPIDWKEL--
General information:
TITO was launched using:
RESULT:
Template:
3FCI.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -100269 for 1803 contacts (-55.6/contact) +
2D Compatibility (PS) -23545 + (NN) -8193 + (LL) 176
1D Compatibility (HY) -18800 + (ID) 5650
Total energy: -156281.0 ( -86.68 by residue)
QMean score : 0.603
(partial model without unconserved sides chains):
PDB file :
Tito_3FCI.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3FCI-query.scw
PDB file :
Tito_Scwrl_3FCI.pdb
: