Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | VHNPNLFNTLKQNEYTLPKDPNTSNEIIDTMLSYLSSTDSELRDNIAYNIFSEWLVVQDNLTTEQKMRIYNYAVNKNNLLFKINIIDSDAVFQRSFLALIIALLLENNKVHNFLTDSEIRETLNLLIELLKNEKNTHSFIEEKGWAHCIAHTADALDELIYQRTISEIDVKKIMTTIAFFYKTNTKMLTGEEDERLSNILITALFEQKISNEEVKNWLISISETIPSYLPEIPLINIKQFTQTLLIKLTVLNYDVDFSLFPIVTRYIRKNDDNSTNKKAL------- |
| 2DB0 Chain:A ((9-247)) | --DIREALANGEHLEKILIMAKYDESVLKKLIELLDDDLWTVVKN-AISIIMVIAKTREDLYEPMLKKLFSLLKK-----------SEAIPLTQEIAKAFGQMAKEK--------PELVKSMIPVLFANYRIGD-----------EKTKINVSYALEEIAKA---NPMLMASIVRDFMSM-------LSSKNREDKLTALNFIEAMGENSFKYVNPFLPRIINLLHD-----GDEIVRASAVEALVHLATLNDKLRKVVIKRLEELNDTSSLVNKTVKEGISRLLLL |
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General information:
TITO was launched using:
| RESULT:
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Template: 2DB0.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -53046 for 1831 contacts (-29.0/contact) +
2D Compatibility (PS) -24431 + (NN) -4988 + (LL) 3748
1D Compatibility (HY) -5200 + (ID) 1150
Total energy: -85067.0 ( -46.46 by residue)
QMean score : 0.381
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