Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMSQKIQVENGVLKTPNNPVIPFIEGDGTGPDIWAAAKRVLDAAVKKAYNGEKEIAWKEVLAGEKAFKQTGEWLPQATLDTID-EYLIAIKGPLTTPIGG--GIRSLNVALRQELDLYVCLRPVRYFKGVPSPVKRPEDTDMVIFRENTEDIYAGIEFKEGSIESKKLIDFLKSEFGVDKIRFPETSGIGIKPISKEGTERLVRSAIEYAIKE------------GRKSLTLVHKGNIMKFTEGAFKNWGYDLCE--REYGDKVFTWNEYDRIKEAEGTEVADAKQNEALAAGKILVKDSIADIFLQQILTRPAEFDVVATMNLNGDYISDALAAQVGGIGIAPGANINYLTGHAIFEATHGTAPKYAGLDKVNPSSVILSGTLLLEHIGWGEAAALINQSMEKTIAAK-TVTYDFARLMDGATEVKCSEFADELIKNF
3TY4 Chain:A ((9-364))---------------RRIVLGLIPADGIGKEVVPAARRLMENLPAKH--K-LKFDFIDLDAGWGTFERTGKALPERTVERLKTECNAALFGAVQSPTHKVAGYSSPIVALRKKMGLYANVRPVKSLDGAK-----GKPVDLVIVRENTECLYVKEERMVQNT-------------------PGKRVAEAIRRISEEASTKIGKMAFEIAKSRQKIRESGTYSIHKKPLVTIIHKSNVMSVTDGLFRESCRHAQSLDPSYAS--------------------------------INVDEQIVDSMVYRLFREPECFDVVVAPNLYGDILSDGAASLIGSLGLVPSANVG--DNFVMSEPVHGSAPDIAGRGIANPVATFRSVALMLEFMGHQDAAADIYTAVDKVLTEGKVLTPDLGGK------SGTNEITDAVLANI


General information:
TITO was launched using:
RESULT:

Template: 3TY4.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -162417 for 2939 contacts (-55.3/contact) +
2D Compatibility (PS) -36616 + (NN) -8779 + (LL) 5760
1D Compatibility (HY) -16800 + (ID) 5200
Total energy: -224052.0 ( -76.23 by residue)
QMean score : 0.627

(partial model without unconserved sides chains):
PDB file : Tito_3TY4.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3TY4-query.scw
PDB file : Tito_Scwrl_3TY4.pdb: