Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | -MIYTITLNPAIDRLLFIQGELEKRKTNRVKKTEFDCGGKGLHVSGVLSKFGIKNEALGIAGSDNLDKLYAILKEKHINHDFLVEAGTSTRECFVVLSDDTNGST-MIPEAGFTVSQTNKVNLLKQIAKKVKKEDM-VVIAGSPPPHYTLSDFKELLRTVKATGAFLGCDNSGEYLNLAVEM-GVDFIKPNEDEVIAILDEKTNSLEENVRKLAEKIPYLVVSLGAKGSICAHNGKLYQVIPPKVQERNDTGAGDVFVGAFIAGLAMN-M-PITETLKVATGCSASKVMQQDS-SSFDLEAAGKLKNQVSIIQLEER |
| 3HIC Chain:A ((2-311)) | SLIYTITLNPAIDRLLFIRGELEKRKTNRVIKTEFDCGGKGLHVSGVLSKFGIKNEALGIAGSDNLDKLYAILKEKHINHDFLVEAGTSTRECFVVLSDDTNGSTMIPEA-GFTVSQTNKDNLLKQIAKK-VKKEDMVVIAGSPPPHYTLSDFKELLRTVKATGAFLGCDNSGEYLNLAVE-MGVDFIKPNEDEVIAILDEKTNSLEENIRTLAEKIPYLVVSLGAKGSICAHNGKLYQVIPPKVQERNDTGAGDVFVGAFIAGL--AMNMPITETLKVATGCSASK-----VMQQFDLEAAGKLKNQVSIIQLEE- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3HIC.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -127410 for 2503 contacts (-50.9/contact) +
2D Compatibility (PS) -32920 + (NN) -16535 + (LL) 1560
1D Compatibility (HY) -37600 + (ID) 14000
Total energy: -226905.0 ( -90.65 by residue)
QMean score : 0.550
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