Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSKVRLYIARHGKTMFNTIGRAQGWSDTPLTTFGELGIKELGLGLKASNISFKEAFSSDSGRTLQTMEIILREVQQENIPYTRDKRIREWCFGSLDGGYDGDLFNGVLPRV-SNGDMSHLTHEE-----------IANLI---CQVDTAGWAEPWAILSNRILSGFTAIAKKIEDIGGGNAIVVSHGMTIATFLWLIDHSTP---RSLGIDNGSVSVVDFEDGTFSIQSIGDMSYREKGREILEKTLQ |
| 3GP3 Chain:A ((9-236)) | --MYKLVLIRHGESTWNKENRFTGWVDVDLTEQGNREARQAGQLLKEAGYTFDIAYTSVLKRAIRTLWHVQDQMDLMYVPVVHSWRLNERHYGALSGLNKAETA-AKYGDEQVLVWRRSYDTPPPALEPGDERAPYADPRYAKVPREQLPLTECLKDTVARVLPLWNESIAPAV-KAGKQVLIAAHGNSLRALIKYLDGISDADIVGLNIPNGVPLVYELDESLTPIRHYYLGS-------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3GP3.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -50756 for 1681 contacts (-30.2/contact) +
2D Compatibility (PS) -22308 + (NN) -7385 + (LL) 1196
1D Compatibility (HY) -5200 + (ID) 2000
Total energy: -86453.0 ( -51.43 by residue)
QMean score : 0.313
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