Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ---MFELKNIAYRYKGNDNKTLENINYSFQSGVFYTILGNSDSGKTTLLSLMAGLDSPTEGQVLFNKKDIKEAGYAQHRKKNIALVFQNYNLLDYLTPLENVQLV-----KPTADKQLLLDLGLK----EDMLTRNILRLSGGQQQRVAIARALVAGTPAILLDEPTGNLDFDIARDITMRLKDFAHKEKRCVIMVTHSR-EIAHMADTALQLTGDNLKELSKESIAQSILQQRNL----------------------------------------------------------------------------------------------------------------- |
| 1Z47 Chain:A ((11-355)) | GSMTIEFVGVEKIYPGGAR-SVRGVSFQIREGEMVGLLGPSGSGKTTILRLIAGLERPTKGDVWIGGKRVTDL---PPQKRNVGLVFQNYALFQHMTVYDNVSFGLREKRVPKDEMDARVRELLRFMRLESYANRFPHELSGGQQQRVALARALAPRPQVLLFDEPFAAIDTQIRRELRTFVRQVHDEMGVTSVFVTHDQEEALEVADRVLVLHEGNVEQFGTPEEVYEKPGTLFVASFIGESNVWTRAVQNGRIEVAGAALPVDPAVSEGSEVAVVVRPKDVELQPASEREAHAQVVRSAFKGSYSACWIRTKDGEVWEVHVPSADRHRWSPGAWVHMNVTRWFIFPR |
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General information:
TITO was launched using:
| RESULT:
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Template: 1Z47.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -108398 for 1744 contacts (-62.2/contact) +
2D Compatibility (PS) -23981 + (NN) -12099 + (LL) 128
1D Compatibility (HY) -14400 + (ID) 3400
Total energy: -162150.0 ( -92.98 by residue)
QMean score : 0.482
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