Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MITLKSAREIEAMDRAGDFLASIHIGLRDIIKPGVDMWEVEEYVRRRCKEENVLPLQIGVDGAVMDYPYATCCGLNDEVAHAFPRHYTLKQGDLLKVDMVLSEPLDKSIVDVSSLNFDNVAQMKKYTETYSGGLADSCWAYAVGEVSQEVKDLMSVTREAMYIGIEKAVIGNRIGDIGAAIQDYAESRGYGVVRDLVGHGVGPTMHEEPMVPNYGTAGRGLRLREGMVLTIEPMINTGTWEIDTDMKTGWAHKTLDGGLSCQYEHQFVITKDGPVILTSQGEERTY |
3TB5 Chain:A ((1-252)) | MITLKSPREIEMMDESGELLADVHRHLRTFIKPGITSWDIEVFVRDFIESHGGVAAQIGY----EGYKYATCCSINDEICHGFPRKKVLKDGDLIKVDMCVDL---------------------------KGAISDSCWSYVVGESTPEIDRLMEVTKKALYLGIEQAQVGNRIGDIGHAIQTYVEGEGYGVVRDFVGHGIGPTIHESPMIPHYGEAGKGLRLKEGMVITIEPMVNTGTWRMKMD-PNGWTAYTEDGGLSCQYEHSLAITKEGPRILTSQGEELTY |
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General information:
TITO was launched using:
| RESULT:
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Template: 3TB5.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -154001 for 2224 contacts (-69.2/contact) +
2D Compatibility (PS) -26902 + (NN) -8357 + (LL) 2004
1D Compatibility (HY) -27600 + (ID) 7600
Total energy: -222456.0 ( -100.03 by residue)
QMean score : 0.536
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