Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNYAQLIKHYGQLLEACGEEVENFIYVLKDLKQWSTTDYLLNQNSSVSDTDQQLMENIFQQLKKHRSPQYITGKAYFRDLIFFVDERVLIPRPETEELVDLILSENKVEDCSVLDIGTGSGAIAISLKKERP-----SWDVLASDISVSALDLAKENANNCDAEVTFIESDVFSNIS-GKFDIIVSNPPYISYNDKDEVGKNVLASEPHSALFADEEGLAIYRKIIENSREYLQPRGKLYFEIGYK-----QGDDLRSLLKRYFPNNRCRVLKDIFGKDRMVVLDNE |
| 2F8L Chain:A ((130-276)) | ------------------------------------------------------------------------------------------------------------KNVSILDPACGTANLLTTVINQLELKGDVDVHASGVDVDDLLISLALVGADLQRQKMTLLHQDGLANLLVDPVDVVISDLPVGYYPDDENAK----TFELC----REEGHSFAHFLFIEQGMRYTKPGGYLFFLVPDAMFGTSDFAKVDKFIKKNGHIEGIIKLPETLFKSQARKSILI |
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General information:
TITO was launched using:
| RESULT:
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Template: 2F8L.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -40733 for 1026 contacts (-39.7/contact) +
2D Compatibility (PS) -15097 + (NN) -9305 + (LL) 9484
1D Compatibility (HY) -6000 + (ID) 1300
Total energy: -62951.0 ( -61.36 by residue)
QMean score : 0.548
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