Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MIGDNIKSLRRTHDLTQPEFAKIIGISRNSLSRYENGTSSVSTELIDRICQKFNVSYVDIVGEDKMMTPVEDYQLTIKIEVLKERGSAILSRLYRHQDEQGIAFDDESNPWILISDDVADLVNTKIYLVDTFEELERYNGYLDGIERMLNLANHQVVA
2P5T Chain:A ((67-158))
------------------------------------------------------------------LNPVEDYELTLKIEIVKERGANLLSRLYRYQDSQGISIDDESNPWILMSDDLSDLIHTNIYLVETFDEIERYSGYLDGIERMLEISEKRMVA
General information:
TITO was launched using:
RESULT:
Template:
2P5T.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -40031 for 558 contacts (-71.7/contact) +
2D Compatibility (PS) -9650 + (NN) -1085 + (LL) 4080
1D Compatibility (HY) -14400 + (ID) 3100
Total energy: -64186.0 ( -115.03 by residue)
QMean score : 0.540
(partial model without unconserved sides chains):
PDB file :
Tito_2P5T.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2P5T-query.scw
PDB file :
Tito_Scwrl_2P5T.pdb
: