Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MSKTYHFIGIKGSGMSALALMLHQMGHNVQGSDVDKYYFTQRGLEQAGVTILPFSPNNISEDLEIIAGNAFRPDNNEELAYVIEKGYHFKRYHEFLGDFMRQFTSLGVAGAHGKTSTTGLLAHVLKNIT-DTSFL--------------IGD-GT------------------------GRG------------S-A-NANYFVFEADEYE-RH-FMPYHPEYSIITNIDFDHPDYFT-GLEDVFNAFNDYAKQVQKGLFIYGEDSKLHEITS----KAPIYYYGFEDSNDFIAKDITRTVNGSDFKVFYNQEEIGQFHVPAYGKHNILNATAVIANLYIMGID--MALVAEHLKTFSGVKRRFTEKIIDDTVIIDDFAHHPTEIIATLDAARQKYPSKEIVAIFQPHTFTRTIALLDDFAHALS-QADSVYLAQIY-GSAREVDNGEVKVEDLA---AKIVKHSDLVTVENVSPLLNHDNAVYVFMGAGDIQLYERSFEELLANLTKNTQ |
1O5Z Chain:A ((51-423)) | -----------------------------------------------------------------------------------------------------EYKTIHIGGTNGKGSVANMVSNILVSQGYRVGSYYSPHLSTFRERIRLNEEYISEEDVVKIYETMEPILNELDKEEIFSPSFFEVVTAMAFLYFAEKNVDIAVLEVGLGGRLDATNVVFPLCSTIVTVDR-------YTIEQIAWEKSGIIKERV-PLVTGERKREALKVMEDVARKKSSRMYVIDKDFSVKVKSLK--LHENRFDYCGE-NTFEDLVLTMNGPHQIENAGVALKTLEATGLPLSEKAIREGLKNAK-NLGRFEILEKNGKMYILDGAHNPHGAESLVRSLKLYFNGEPLSLVIGILDDKN----REDILRKYTGIFERVIVTRVPSPRMKDM--NSL-VDMAKKFFKNVEVIEDPLEAIE------STERATVVTGSLFLVGYVREFLTTGKINEEWKL |
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General information:
TITO was launched using:
| RESULT:
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Template: 1O5Z.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -202749 for 2548 contacts (-79.6/contact) +
2D Compatibility (PS) -31892 + (NN) -9701 + (LL) 7092
1D Compatibility (HY) -6800 + (ID) 2100
Total energy: -246150.0 ( -96.61 by residue)
QMean score : 0.514
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