Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MMKHDIEKVLISEEEIQKKVKELGAELTSEYQD------TFPLA-IGVLKGALPFMADLIKHIDTY---LEMDFMDVSSYGNSTVSSGEVKIIKDLDTSVEGRDILIIEDIIDSGLTLSYLVELFRYRKAKSIKIVTLLDKPSGRKADIKADFVGFEVPDAFVVGYGLDYAERYRNLPYIGVLKPAVYES
1P17 Chain:A ((9-190))
------EKILFTEEEIRTRIKEVAKRIADDYKGKGLRPYVNPLVLISVLRGSFMFTADLCRALCDFNVPVRMEFICVSSYG---TSSGQVRMLLDTRHSIEGHHVLIVEDIVDTALTLNYLYHMYFTRRPASLKTVVLLDKREGRRVPFSADYVVANIPNAFVIGYGLDYDDTYRELRDIVVLRPEVY--
General information:
TITO was launched using:
RESULT:
Template:
1P17.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -139368 for 1267 contacts (-110.0/contact) +
2D Compatibility (PS) -18306 + (NN) -4857 + (LL) 672
1D Compatibility (HY) -21600 + (ID) 3900
Total energy: -187359.0 ( -147.88 by residue)
QMean score : 0.558
(partial model without unconserved sides chains):
PDB file :
Tito_1P17.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1P17-query.scw
PDB file :
Tito_Scwrl_1P17.pdb
: