Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAKQKIRIRLKAYDHRILDQSAEKIVETAKRSGASVSGPIPLPTEKSVYTILRAVHKYKDSREQFEMRTHKRLIDIVNPTPQTVDALMRLDLPSGVDIEIKL
3D3B Chain:J ((6-86))
MQNQRIRIRLKAFDHRLIDQATAEIVETAKRTGAQVRGPIPLPTRS---------------------RTHLRLVDIVEPTEKTVDALMRLDLAAGVDVQISL
General information:
TITO was launched using:
RESULT:
Template:
3D3B.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -39841 for 559 contacts (-71.3/contact) +
2D Compatibility (PS) -8904 + (NN) -3523 + (LL) 2052
1D Compatibility (HY) -10000 + (ID) 2800
Total energy: -63016.0 ( -112.73 by residue)
QMean score : 0.759
(partial model without unconserved sides chains):
PDB file :
Tito_3D3B.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3D3B-query.scw
PDB file :
Tito_Scwrl_3D3B.pdb
: