Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMTMKQFEIAAIPGDGVGKEVVAAAEKVLHTAAEVHGGLSFSFTAFPWSCDYYLEHGKMMPEDGIHTL-TQFEAVFLGAVGNPKLVPDHISLWGLLLKIRRELELSINMRPAKQMAGITSPLLHPNDFDFVVIRENSEGEYSEVGGRIHRGDDEIAIQNAVFTR----------KATERVMRFAFELAKKRRSHVTSATKS------NGIYH---AMPFWDEVFQQTA-------ADYSGIETSSQHIDALAAFFVTRPETFDVIVASNLFGDILTDISSSLMGSIGIAPSANINPSGKYPSMFEPVHGSAPDIAGQGLANPIGQIWTAKLMLDHFGEEELGAKILDVMEQVTADG-IKTRDIGGQSTTAEVTDEICSRLRKL
3TY4 Chain:B ((9-364))---RRIVLGLIPADGIGKEVVPAARRLMENLPAKHK-LKFDFIDLDAGWGTFERTGKALPERTVERLKTECNAALFGAVQSPTHKVAGYS--SPIVALRKKMGLYANVRPVKSLDGAKG-----KPVDLVIVRENTECLYVK---------EERMVQNTPGKRVAEAIRRISEEASTKIGKMAFEIAKSRQKIRESGTYSIHKKPLVTIIHKSNVMSVTDGLFRESCRHAQSLDPSYASINVDEQIVDSMVYRLFREPECFDVVVAPNLYGDILSDGAASLIGSLGLVPSANV---GDNFVMSEPVHGSAPDIAGRGIANPVATFRSVALMLEFMGHQDAAADIYTAVDKVLTEGKVLTPDLGGKSGTNEITDAVLANI---


General information:
TITO was launched using:
RESULT:

Template: 3TY4.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 1816 -179519 -98.85 -547.31
target 2D structure prediction score : 0.68
Monomeric hydrophicity matching model chain B : 0.80

3D Compatibility (PKB) : -98.85
2D Compatibility (Sec. Struct. Predict.) : 0.68
1D Compatibility (Hydrophobicity) : 0.80
QMean score : 0.472

(partial model without unconserved sides chains):
PDB file : Tito_3TY4.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3TY4-query.scw
PDB file : Tito_Scwrl_3TY4.pdb: