Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMAERMVGKQAPRFEMEAVLASKEFGKVSLEENMKNDKWTVLFFYPMDFTFVCPTEITAMSDRYDEFEDLDAEVIGVSTDTIHTHLAWINTDRKENGLGQLKYPLAADTNHEVSREYGVLIEEEGVALRGLFIINPEGELQYQTVFHNNIGRDVDETLRVLQALQ----TGGLCPANWKPGQKTL
4K1F Chain:A ((8-180))-----INSPAPSFEEVALMPNGSFKKISLSS--YKGKWVVLFFYPLDFTFVCPTEVIAFSDSVSRFNELNCEVLACSIDSEYAHLQWTLQDRKKGGLGTMAIPILADKTKNIARSYGVLEESQGVAYRGLFIIDPHGMLRQITVNDMPVGRSVEEVLRLLEAFQFVEKHGEVCPANWKKG----


General information:
TITO was launched using:
RESULT:

Template: 4K1F.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 817 -117758 -144.13 -696.79
target 2D structure prediction score : 0.60
Monomeric hydrophicity matching model chain A : 0.80

3D Compatibility (PKB) : -144.13
2D Compatibility (Sec. Struct. Predict.) : 0.60
1D Compatibility (Hydrophobicity) : 0.80
QMean score : 0.591

(partial model without unconserved sides chains):
PDB file : Tito_4K1F.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4K1F-query.scw
PDB file : Tito_Scwrl_4K1F.pdb: