Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMDVIKISPRGYCYGVVDAMVIAKNASLDKSLPRPIYILGMIVHNKHVTDAFEEEGIFTLDGSNRLDILKQVDKGTVIFTAHGVSPEVRRIAEEKGLVAIDATCPDVTKTHNLILEMKEKGYHVIYIGKKGHPEPEGAVG--VAPE-IVHLVETEEDVKNLDIQS-EKLIVTNQTTMSQWDVHDIMELVKEKYPHV--EYHQEICLATQVRQEAVSEQAKKADLTIVVGDPKSNNSNRLAQVSEEIAGTKAYRIGDLSELKLEWLKGVNTVAVTAGASTPTPITKEVIRFLEQFDHEDPSTWTTEHNIPLKKILPKVKAKN
3T0G Chain:A ((13-297))MQILLANPRGFCAGVDRAISIVENAL--AIYGAPIYVRHEVVHNRYVVDSLRERGAIFIE-----QISEVPDGAILIFSAHGVSQAVRNEAKSRDLTVFDATCPLVTKVHMEVARASRRGEESILIGHAGHPEVEGTMGQYSNPEGGMYLVESPDDVWKLTVKNEEKLSFMTQCTLSVDDTSDVIDALRKRFPKIVGPRKDDICYATTNRQEAVRALAEQAEVVLVVGSKNSSNSNRLAELAQRM-GKRAFLIDDAKDIQEEWVKEVKCVGVTAGASAPDILVQNVVARLQQL---------------------------


General information:
TITO was launched using:
RESULT:

Template: 3T0G.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1577 -25038 -15.88 -89.74
target 2D structure prediction score : 0.68
Monomeric hydrophicity matching model chain A : 0.79

3D Compatibility (PKB) : -15.88
2D Compatibility (Sec. Struct. Predict.) : 0.68
1D Compatibility (Hydrophobicity) : 0.79
QMean score : 0.616

(partial model without unconserved sides chains):
PDB file : Tito_3T0G.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3T0G-query.scw
PDB file : Tito_Scwrl_3T0G.pdb: