Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAGQKIRIRLKAYDHEAIDASARKIVETVVRTGASVVGPVPLPTEKNVYCVIRSPHKYKDSREHFEMRTHKRLIDIIDPTPKTVDALMRIDLPASVDVNIQ
3R2C Chain:K ((3-80))
--QEKIRIKLRAYDHRLLDQSVKQIIETVKRTGGVVKGPIPLPTRKSEFS---------------------RILDIIRFTPQTIEALMEISLPAGVDVEVK
General information:
TITO was launched using:
RESULT:
Template:
3R2C.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -54085 for 541 contacts (-100.0/contact) +
2D Compatibility (PS) -8650 + (NN) -4998 + (LL) 1792
1D Compatibility (HY) -8000 + (ID) 2150
Total energy: -76091.0 ( -140.65 by residue)
QMean score : 0.748
(partial model without unconserved sides chains):
PDB file :
Tito_3R2C.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3R2C-query.scw
PDB file :
Tito_Scwrl_3R2C.pdb
: