Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MLTGVTRQKILITGASSGLGAGMARSFAAQGRDLALCARRTDRLTELKAELSQRYPDIKIAVAELDVNDHERVPKVFAELSDEIGGIDRVIVNAGIGKGARLGSG-------KLWANKATIETNLVAAL---VQIETALDMFNQRGSGHLVLISSVLGVKGVPGVKAA-YAASKAGVRSLGESLRAEYAQRPIRVTVLEPGYIESEMTAKSASTMLMVDNATGVKALVAAIEREPGRAAVPWWPWAPLVRLMWVLPPRLTRRFA
3CSD Chain:B ((30-225))
----------LVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKEL--REAGVEADGRTCDVRSVPEIEALVAAVVERYGPVDVLVNNAG-----RLGGGATAELADELWLD--VVETNLTGVFRVTKQVLKAGGML-ERGTGRIVNIASTGGKQGV--VHAAPYSASKHGVVGFTKALGLELARTGITVNAVCPGFVETPMAAS------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
3CSD.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -103983 for 1417 contacts (-73.4/contact) +
2D Compatibility (PS) -18903 + (NN) -6133 + (LL) 5692
1D Compatibility (HY) -13200 + (ID) 3300
Total energy: -139827.0 ( -98.68 by residue)
QMean score : 0.530
(partial model without unconserved sides chains):
PDB file :
Tito_3CSD.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3CSD-query.scw
PDB file :
Tito_Scwrl_3CSD.pdb
: