Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSLPKPNNQTTVVITGASSGIGVELARGLAGRGFPLMLVARRRERLDELADQLRQEHCVGVEVLPLDLADTQARAQLADRL----RSDAIAGLCNSAGFGTSGRFWELPFARESEEVVLNALALMELTHAALPGMVKRGAGAVLNIASIAGFQPIPYMAVYSATKAFVLTFSEAVQEELHGTGVSVTALCPGPVPTEWAEIASAERFSIPLAQVSPHDVAEAAIAGMLSGKRTVVPGIVPKFVSTSGRFAPRSLLLPAIRIGNRLRGGPSR
3UF0 Chain:A ((33-213))
----------TAVVTGAGSGIGRAIAHGYA-RAGAHVLAWGRTDGVKEVADEI-ADGGGSAEAVVADLADLEGAANVAEELAATRRVDV---LVNNAGIIARAPAEEVSLGRWREVLTVNLDAAWVLSRSFGTAMLAHGSGRIVTIASMLSFQGGRNVAAYAASKHAVVGLTRALASEWAGRGVGVNALAPGYVVT---------------------------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
3UF0.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -113076 for 1474 contacts (-76.7/contact) +
2D Compatibility (PS) -19598 + (NN) -13669 + (LL) 4936
1D Compatibility (HY) -8000 + (ID) 3150
Total energy: -152557.0 ( -103.50 by residue)
QMean score : 0.501
(partial model without unconserved sides chains):
PDB file :
Tito_3UF0.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3UF0-query.scw
PDB file :
Tito_Scwrl_3UF0.pdb
: