Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSPATVLDSILEGVRADVAAREASVSLSEIKAAAAAAPPPLDVMAALR-EPGIGVIAEVKRASPSAGALATIADPAKLAQAYQDGGARIVSVVTEQRRFQGSLDDLDAVRASVSIPVLRKDFVVQPYQIHEARAHGADMLLLIVAALEQSVLVSMLDRTESLGMTALVEVHTEQEADRALK-AGAKVIGVNARDLMTLDVDRDCFARIAPGLPSSVIRIAESGVRGTADLLAYAGAGADAVLVGEGLVTSGDPRAAVADLVTAGTHPSCPKPAR |
| 1I4N Chain:A ((1-248)) | ----RRLWEIVEAKKKDILEIDGE-NL---I----VQRRNHRFLEVLSGKERVKIIAEFKKASPSAGDINADASLEDFIRMYDE-LADAISILTEKHYFKGDPAFVRAARNLTCRPILAKDFYIDTVQVKLASSVGADAILIIARILTAEQIKEIYEAAEELGMDSLVEVHSREDLEKVFSVIRPKIIGINTRDLDTFEIKKNVLWELLPLVPDDTVVVAESGIKDPRELKDLR-GKVNAVLVGTSIMKAENPRRFLEEMRA------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 1I4N.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -137075 for 1961 contacts (-69.9/contact) +
2D Compatibility (PS) -26210 + (NN) -4512 + (LL) 872
1D Compatibility (HY) -18400 + (ID) 3500
Total energy: -188825.0 ( -96.29 by residue)
QMean score : 0.539
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