Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MRARRLVMLRHGQ-TDYNVGSRMQ----G-QLDTELSELGRTQAVAAAEVLGK--RQPLLIVSSDLRRAYDTAVKLGERTGLVVRVDTRLRETHLGDWQGLTHA----QIDADAPGAR-LAWREDATWAPHGGESRVDVAARSRPLVAELVASEPEWGGADEPDRPVVLVAHGGLIAALSAALLKLPVANW-----PALGGMGNASWTQLSGHWAPGSDFESIRWRLDVWNASAQVSSDVL |
| 2YN2 Chain:A ((11-246)) | -AIENIYIARHGYRSNWLPKGPYPPPPTGIDNDVPLSEHGVEQAHELANYISKLDVKPEMIFSSPFYRCLETSKPTVEALKIPLYVDRGVGEWYKPDRPIIPEPATHEVMSKFFPSMISPDWE-PSIIPSNKGETEEDIFERCHKFWPVFIDRVERK---FPNVKTIMIVTHAATKSALGMNLLKFSSAKEPIDNKGTFIRNGSCAIDKFEL------PFEEREWKLTMNGNTSFLTNG-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2YN2.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -58195 for 1723 contacts (-33.8/contact) +
2D Compatibility (PS) -22714 + (NN) -11729 + (LL) 484
1D Compatibility (HY) -8400 + (ID) 2150
Total energy: -102704.0 ( -59.61 by residue)
QMean score : 0.381
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