Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MVLGFWDIAVPIVGAPMAGGPS-------TPALAAAVSNAGGLGFVAGGYLSA--DRLADDIAAARAAT-TGPIGANLFVPQPSVADWAQLEYYADELEEVAEYYHTEVGQPVYGDDDDWVRKL-EVVADVRPEVVSFTFGAPP------PDVVQRLSA-LGLLVSITVT----SVYEAGVAIAAGADSLVVQGPAAGGHRGTFA---PDMEPGTESLHQLLDRIGSAH-DVPLVAAGGLGTAEDVAAVLRRGAIAAQVGTALLLADEAGTNAAHRAALKNPEFDATLVTRAFSGRYARGLANNFTRLLDHVAPLGYPEVHQMTKPIRAAAVQADDPHGTNLWAGSAHRKTRPGPAADIIASLTPDVCSA |
| 1P0K Chain:A ((49-288)) | -IGELS-SSSPIFINAMTG-GGGKLTYEINKSLARAASQAGIPLAVGSQMSALKDPSERLSYEIVRKENPNGLIFANLGSEAT-------------------------------------AAQAKEAVEMIGANALQIHLNVIQEIFSGALKRIEQICSRVSVPVIVKEVGFGMSKASAGKLYEAGAAAVDIGG-----------RQISFFNSWGISTAASLAEIRSEFPASTMIASGGLQDALDVAKAIALGASCTGMAGHFLKALT------------------------------------------------------------------------------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 1P0K.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -151560 for 1580 contacts (-95.9/contact) +
2D Compatibility (PS) -21228 + (NN) -14450 + (LL) 8168
1D Compatibility (HY) -3200 + (ID) 2150
Total energy: -184420.0 ( -116.72 by residue)
QMean score : 0.466
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