Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTRVVLSVGSNLGDRLARLRSVADGLGD----ALIAASPIYEADPWGGVEQGQFLNAVLIADDPTCEPREWLRRAQEFERAAGRVR-GQRWGPRNLDVDLIACYQTSATEALVEVTARENHLTLPHPLAHLRAFVLIPWIAVDPTAQLTVAGCPRPVTRLLAELEPADRDSVRLFRPSFDLNSRHPVSRAPES
3IP0 Chain:A ((1-152))
-TVAYIAIGSNLASPLEQVNAALKALGDIPESHILTVSSFYRTPPLGPQDQPDYLNAAVALE-TSLAPEELLNHTQRIELQQGRVRKAERWGPRTLDLDIMLF---------GNEVINTERLTVPHYDMKNRGFMLWPLFEIAPELVFP--D-GEMLRQILHTRAF---------------------------
General information:
TITO was launched using:
RESULT:
Template:
3IP0.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -92142 for 1119 contacts (-82.3/contact) +
2D Compatibility (PS) -15901 + (NN) -6848 + (LL) 2448
1D Compatibility (HY) -11600 + (ID) 2200
Total energy: -126243.0 ( -112.82 by residue)
QMean score : 0.525
(partial model without unconserved sides chains):
PDB file :
Tito_3IP0.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3IP0-query.scw
PDB file :
Tito_Scwrl_3IP0.pdb
: