Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSDYQETLYQGYGQRFSIDNMLHEVRTEHQHLVIFEN---ARMGRVMALDGVIQTTEADEFIYHEMLTHVPILAHGAARRVLIIGGGDGGMLREVAKHKSVERITMVEIDGTVVDMCKEFLPNHSQGAFDDPRLNLVIDDGMRFV-ATTEERFDVIISDSTDPIGPGEVLFSENFYQACRRCLNEGGILVTQNGTPFMQLEEVRTTA--ARTDGLFADWHFYQAAVPTYIGGAMTFAWGSTHEGLR-RLPLETLRQRFRDSGIAT--RYYNADIHLGAFALPQYVLQAIGKQDND |
| 4YUY Chain:B ((27-296)) | --------WPGQAMSLRVEKVLYDAPTKFQHLTIFESDPKGPWGTVMALDGCIQVTDYDEFVYHEVLGHTSLCSHPKPERVLIIGGGDGGVLREVLRHGTVEHCDLVDIDGEVMEQSKQHFPQISR-SLADPRATVRVGDGLAFVRQTPDNTYDVVIIDTTDPAGPASKLFGEAFYKDVLRILKPDGICCNQGESIWLDLELIEKMSRFIRETG-FASVQYALMHVPTYPCGSIGTLVCSKKAGVDVTKPLRPV----EDMPFAKDLKYYDSEMHKASFALPRFARHIN------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 4YUY.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -151974 for 2287 contacts (-66.5/contact) +
2D Compatibility (PS) -28050 + (NN) -12912 + (LL) 1768
1D Compatibility (HY) -24400 + (ID) 5250
Total energy: -220818.0 ( -96.55 by residue)
QMean score : 0.500
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