Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSKNARYAWRLSLGGLLLGLLACAVYLLAVPLGFKYGEIQVGHGLEHEGRIAWDAAGVPHIRAQSLEDGYFLLGYSHARDRLWQMEFARRYAGGTLSEVFGAKTLPMDRFARTLGFRRTAEGIYANLDAPTRVLLQRYSDGINAYLELAPAALPLEFSLVRHERPGPWGPVDSLSLHLLYSWTLSANLGMQLQRLALAEHLDLARINEVFAPYPGERPPATRDYASLYRSLHGTPDAGKLLGQLPGSNVEGIGSNNWVVSASRSATGKPLLANDPHLRLTNPAAFYLASLKIPGLSLTGANFAGAPLFVIGHNQRIAWGYTNTGSHIQDAYLERVDPQDPRRYLTPDGYRPFETRLERIAVRDGETVSLEVRSTRHGPVISDIYEPARLPQAQRDRLVIALAWTGLDRHDKTFPSLLAINRAEGWEQFLDAAANFGVPPQNMVYADVEGNIGYVSAGRVPLRGADDDLHGLAPSPGWESRYDWVGYVPESAKPRSLNPREGFIATANQRIVPPDNAFD--FGHDWVLPYRYDRIREWLGGPGQRTLEDSLEL--QNDEFSSVMASLLPKMLEQVSDP--ELRASEAFALLQGWNHQAAAD-------LAAPLIAGYWVRAFTRELLQPRIGTQLLAS------G-------WNQRNYDGFLRLI---LDGQADLRFWC---GQ--EQGCDLKLNQSLRRALDELRAAHGSAPSGWKWGEAHAALAEHVPFHKTPLRALFDLKN-NKGGDNFSVNVGRFDYSDPANPFNTRIAATLRMVIDLADF-DNSRYALSTRNSGLP-----FD-GATDLNELWARGAYIRIADDAPDATDRQLVLRPSASSSGEPRP |
| 1CP9 Chain:B ((1-539)) | -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SNVWLVGKTKASGAKAILLNGPQFGWFNPAYTYGIGLHGAGFNIVGNTPFAYPAILFGHNGHVSWGSTAGFGDGVDIFAEQVSPEDPNSYLHQGQWKKMLSRQETLNVKGEQPITFEIYRTVHGNVVKRDKTT-------HTAYSKARAWDGKEL--TSLMAWVKQGQAQNWQQWLDQAQ-NQALTINWYYADKDGNIGYVHTGHYPDRQINH--DPRLPVSGT-GEWDWKGIQPFANNPKVYNPKSGYIANWNNSPAK-NYPASDLFAFLWGSADRVKEIDNRIEAYDKLTADDMWAILQQTSRVDLNHRLFTPFLTQATQGLPSNDNSVKLVSMLQQWDGINQLSSDGKHYIHPGSAILDIWLKEMLKATLGQTVPAPF-DKWYLASGYETTQEGPTGSLNISTGAKLLYESLL-E-DKSPISQSIDLFSGQPQNDVIRKTLNTTYQKMIEKYGDNPANWQTPATALTFRENNFFGI----------PQALPQENFHQN--E---------Y--HNRGTENDLIVFTEEGVSAWDVVAPGQSGFISPQGKPSPHYQDQLSLYQQFGKKPLWLNSEDVAPYIESTETLIIER----- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1CP9.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -140770 for 3962 contacts (-35.5/contact) +
2D Compatibility (PS) -53572 + (NN) -30602 + (LL) 17640
1D Compatibility (HY) -13200 + (ID) 5450
Total energy: -225954.0 ( -57.03 by residue)
QMean score : 0.363
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