Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSKQILVLPGDGIGPEIMAEAVKVLELANDRFQLGFELAEDVIGGAAIDKHGVP--LADQTLQRARQADAVLLGAVGGPKWDRIERDIRPERGLLKIRSQLGLFANLRPAILYPQLAAASSLKPEVVAGLDILIVRELTGGIYFGQPREQRVLENGERQAYDTLPYSESEIRRIARVGFDMARV--RNNRLCSVDKANV--LASSQLWREVVEEVAKDYPDVELSHMYVDNAAMQLVRAPKQFDVMVTDNMFGDILSDEASMLTGSIGMLPSASLDANNKGMYEPCHGSAPDIAGQGIANPLATILSVSMMLRYSFSQATAADAIEQAVSKVLDQG-LRTGDI--WSEGCRKVGTREMGDAVVAALKNL |
| 2D1C Chain:B ((20-355)) | --KLITVIPGDGIGPECVEATLKVLEAA--KAPLAYEVRE---AGASVFRRGIASGVPQETIESIRKTRVVLKGPLETPV------GYGEKSANVTLRKLFETYANVRPVREFPNVPT-----PYAGRGIDLVVVRENVEDLYAGIEHMQ---TPSVAQTLKLISWKGSE--KIVRFAFELARAEGRKKVHCAT-KSNIMKLAEGTLKR-AFEQVAQEYPDIEAVHIIVDNAAHQLVKRPEQFEVIVTTNMNGDILSDLTSGLIGGLGFAPSANI-GNEVAIFEAVHGSAPKYAGKNVINPTAVLLSAVMMLRY-LEEFATADLIENALLYTLEEGRVLTGDVVGYDRGAK---TTEYTEAIIQNL--- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2D1C.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -177156 for 2889 contacts (-61.3/contact) +
2D Compatibility (PS) -35051 + (NN) -12565 + (LL) 2200
1D Compatibility (HY) -24400 + (ID) 6500
Total energy: -253472.0 ( -87.74 by residue)
QMean score : 0.542
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