Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMIEADYLVIGAGIAGASTGYWLSAHG--RVVVLEREAQPGYHSTGRSAAHYTVAYGTPQVRALTAASRAFFDNPPAGFCEHPLLSPRPEMVVDFSDDPEELRRQYESGKALVPQMRLLDAEQACSIVPVLRR------------DKVFGATYDPTGADIDTDALHQGYLRGIRRNQGQVLCNHEALEIRRV----------------DGAWEVRCDAG--SYRAAVLVNAAGAWCDAIAGLAGVRPLGLQPKRRSAFIFAPPPGIDCHDWPM----------LVSLDESFYLKPDAG---MLLGSPA----NADPVEAHDVQPEQLDIATGMYLIEEATTLTIRRPEHTWAGLRSFVADGDLVAGYAANAEGFFWVAAQGGYGIQTSAAMGEASAALIRHQPLP--AHLREHGLDEAMLSPRRLSP---
3VQR Chain:A ((22-446))-PRFDYVVVGAGVVGLAAAYYLKVWSGGSVLVVDAGHAPGSGDSGRSMAAFRTFFSSTMNRLVAGSTVRLFEDAQR-GGEDLGLVKSGYLFVYDRERWREVEEPLREAGEEGRDYLIIPPEELERRLGMNTRVSDGEEAEVLGVGDVEGAVLIRSAGFLDAEKVVDYYYRRASGAGVEFIFGRRVVGVELKPRVELGIEGEPLPWQEARASAAVLSDGTRVEVGEKLVVAAGVWSNRLLNPLGI-DTFSRPKKRMVFRVSASTEGLRRIMREGDLAGAGAPPLIILPKRVLVRPAPREGSFWVQLSDNLGRPFALEEDPQPEEHYYSLAILPILSLYLPQFQDAYPSGGWAGHYDISFDANPVVFEP-WESGIVVAAGTSGSGIMKSDSIGRVAAAVALGMESVELYGGVEMPVKWMGLEGRRYEQERL


General information:
TITO was launched using:
RESULT:

Template: 3VQR.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -140328 for 3273 contacts (-42.9/contact) +
2D Compatibility (PS) -38226 + (NN) 3820 + (LL) 280
1D Compatibility (HY) -12400 + (ID) 3450
Total energy: -190304.0 ( -58.14 by residue)
QMean score : 0.391

(partial model without unconserved sides chains):
PDB file : Tito_3VQR.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3VQR-query.scw
PDB file : Tito_Scwrl_3VQR.pdb: