Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MSSNIPQNAVEVDTLSSIYTYKELSIDKLKHEYEITVGSNYIEQKVNSRLQEIAKNAKLPGFRSGKMPYDLVVTNYKNEALEYVVNSTIDYCSSDLMKKIEVKSHIYPKVDIMSLPNLNEEGEKSNFVYKLSFESMPEVPVIDLDKINLKKVEARIEEEDIKGFVDSIKTRFPSFVSVDDASYQAKNGDKLVIDFEGRIRNKLFQGGSNKNFKVTLGSGTFINGFENQLTGMKKGETKSFKLKFPEDYQTISLAGQEANFSVRVNDIQVAEDFGGDDEMAKKIGFRDCSSLKNHAKEVIGGQCEEMRDLLIKKELFDYLDANYSFDLPTDVVRQEQQRVERELGSKDDSCKEAERRVKLAMLFMKFSTEHKISLTQNDILNVIVNQYISKDVPFDRVFKHFKSDRQFQELVRGQALEHKVTSYIIEKVNKEEQIVSVKELKELFGNI |
1P9Y Chain:A ((4-120)) | ------------------MQVSVETTQGLGRRVTITIAADSIETAVKSELVNVAKKVRIDGLRKGKVPMNIVAQRYGASVRQDVLGDLMSRNFIDAIIKEKINPAGAPTYVP------GEYKLGEDFTYSVEFEVYPEVEL------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 1P9Y.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -33477 for 727 contacts (-46.0/contact) +
2D Compatibility (PS) -12298 + (NN) 92 + (LL) 22196
1D Compatibility (HY) -6400 + (ID) 1450
Total energy: -31337.0 ( -43.10 by residue)
QMean score : 0.447
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