Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MFYDEKKTYQRIEERLEVISSFNAHNEHKNLQDEFKGAGISRRDLLKWAGMMSVTLALPASFAPLTLKAVEVANRLPVIWLHMAECTGCSESLLRSADPTIDSIIFDYINLEYHETIMVASGFQAEKSLHDAIEKHKNNYILMVEGGIP--QGTEYFLTQG-PNAETGAEECRKVAQHAAAIFAIGTCSSFGGVQAAYPNPSNAQPLHKIIDKPVINVPGCPPSEKNIVGNVLYYLMFGTLPKLDAYNRPSWAYGNRIHDLCERRGHFDAGEIVEHFGDENAKKGFCLYKMGCKRPYTFNNCSKLRFNSHTSWPIGAGHGCIGCSEPNFWDTMSPFEEPLANRSIKTAFDGLGADKVADKVGTTLLSATAIGIAAHALLSKAIKNKE |
1YRQ Chain:A ((5-262)) | -------------------------------------------------------------------------HRPSVVWLHNAECTGCTEAAIRTIKPYIDALILDTISLDYQETIMAAAGEAAEAALHQALEG-KDGYYLVVEGGLPTIDGGQWGMVAGHPMIET----TKKAAAKAKGIICIGTCSAYGGVQKAKPNPSQAKGVSEALGVKTINIPGCPPNPINFVGAVVHVLTKG-IPDLDSNGRPKLFYGELVHDNCPRLPHFEASEFAPSFDSEEAKKGFCLYELGCKGPVTYNNCPKVLFN-QVNWPVQAGHPCLGCSEPDFWDTMTPFYEQG----------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1YRQ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -147385 for 2171 contacts (-67.9/contact) +
2D Compatibility (PS) -26921 + (NN) -14113 + (LL) 9472
1D Compatibility (HY) -21600 + (ID) 6650
Total energy: -207197.0 ( -95.44 by residue)
QMean score : 0.397
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