Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKMIAASIMCADSLHLADELRALEQANVKMLHCDVMDGVFVENAAMGAYVLQDIKNNT-KMLLDIHLATVNPDKFVDLYAAIKPAYMSFHLEASRD----VNATINHIRELGIRPSIAISPDTEIEQIYPFLG--KVDMVLMMTVNPGFAGQKFQHHVLEKIKKLQKELESHTNKPLIEVDGNIFEETVRLLEPIGADVYVVGTAALFNEKAGSYTEKLAPLREIIQER
1TQX Chain:A ((5-223))
KAIIAPSVLASNISKLAEETQRMESLGAEWIHLDVMDMHFVPNLSFGPPVINNLKKYTKSIFFDVHLMVEYPEKYVPLL--KTSNQLTFHFEALNEDTERCIQLAKEIRDNNLWCGISIKPKTDVQKLVPILDTNLINTVLVMTVEPGFGGQSFMHDMMGKVSFLRKKY----KNLNIQVDGGLNIETTEISASHGANIIVAGTS-IFNAEDP--KYVIDTMRVSVQK-
General information:
TITO was launched using:
RESULT:
Template:
1TQX.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -181403 for 1833 contacts (-99.0/contact) +
2D Compatibility (PS) -22557 + (NN) -6644 + (LL) 768
1D Compatibility (HY) -17600 + (ID) 3400
Total energy: -230836.0 ( -125.93 by residue)
QMean score : 0.643
(partial model without unconserved sides chains):
PDB file :
Tito_1TQX.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1TQX-query.scw
PDB file :
Tito_Scwrl_1TQX.pdb
: