Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTKYIKADRFFYADH----VKENGYLEIKDNHFGKWIENIS---GQEEILDYSGYQIAPGLVDTHIHGFAGAD-----------VMD----------CDSEG----ILRMSAGLLSTGVTSFLPTTLTSDTKRLEEASKSVAAVAGKEQGAKIQGIYFEGPYFTEEYKGAQNPIYMRNPNLEEFAQWQKAA---KGLITKIALAPE------REGVEEFVSAITKQGVTVALGHSNGTYKEAKKAVK-AGASV--WVHAYNGMRGLTHREPGMVGAVYNLPNTYAELICDGHHVDPVACDILMTQKGHNHVALITDCMAAGGAPDGDYMLGELPVVVSNGTARLKDGGNLAGSILKLKDGLKNVVEW------------GIATPEEAVRMASYVPAVSVGIDNVCGQIKEGYAADFIVLDKHL----------------------DLVATYLDGEKRWQS |
| 2I9U Chain:A ((10-427)) | -LKIFKGNLIFTKTSDKFTIMKDSYIVVIDGKIASVSSNLPDKYKGNPIIDFRNNIIIPGMNDLHAHASQYKNLGIGMDKELLPWLNNYTFPEEAKFLNVDYAKKTYGRLIKDLIKNGTTRVALFATLH-KDSTIELFNMLIK-----SGIGAY---VGKVNMDYNCPDYLTENYI--TSLNDTEEIILKYKDKSNIVKP-IITPRFVPSCSNELMDGLGKLSYKYRLPVQS-HLSENLDEIAVVKSLHKKSNFYGEVYD---------KFGLFGN-------TPTLMAHCIHSSKEEINLIKRNNVTIVHCPTSNFNLGSGMM-------PVRKYLNLGINVVLGSDISAGHTCSLFKVIAYAIQNSKIKWQESGKKDMFLSTSEAFYMATKKGGSFFG---KVGSFEEGYDFDALVINDSNLYPEDYDLTERLERFIYLGDDRNIMKRYVCGNEIF-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2I9U.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -115600 for 2972 contacts (-38.9/contact) +
2D Compatibility (PS) -36644 + (NN) -13443 + (LL) 1228
1D Compatibility (HY) -11200 + (ID) 2550
Total energy: -178209.0 ( -59.96 by residue)
QMean score : 0.377
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