Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MPEFRVWAPKPALVRLDVNGAVHAMTRSADGWWHTT-VAAPADARYGYLLDDDPTVLPDPRSARQPDGVHARSQRWEPPGQFGAARTDTGWPGRSVEGAVIYELHIGTFTTAGTFDAAIEKLDYLVDLGIDFVELMPVNSFAGTRGWGYDGVLWYSVHEPYGGPDGLVRFIDACHARRLGVLIDAVFNHLGPSGNYLPRFGP-YLSS-ASNPWGDGINIAGADSDEVRHYIIDCALRWMRDFHADGLRLDAVHALVDTTAVHVLEELANATRWLSGQLGRPLSLIAETDRNDPRLITRP-SHGGYGITAQWNDDIHHAIHTAVSGERQGYYADFGS--LATLAYTLRNGYFHAGTYSSFRRRRHGRALDTSAIPATRLLAYTCTHDQVGNRALGDRPSQYLTGGQLAIKAALTLGSPYTAMLFMGEEWGASSPFQFFCSHPEPELAHSTVAGRKEEFAEHGWAADDIPDPQDPQTFQRCKLNWAEAGSGEHARLHRFYRDLIALRHNEADLAD-----PWLDHLMVDYDEQQRWVVMRRG----QLMIACNLGAEPTCVPVSGELVLAWESPIIGD--NSTELAAYSLAILRAAEPA |
| 3M07 Chain:A ((44-613)) | -VRFRLWATGQQKVMLRLAGKDQEMQANGDGWFTLDVAGVTPGTEYNFVLSD-GMVVPDPASRAQKTDVNGPSYVVDPGSY---TWRNTGWKGSRWEQAVVYEMHTGTFTPEGTFRAAIAKLPYLAELGVTVIEVMPVAQFGGERGWGYDGVLLYAPHSAYGTPDDFKAFIDAAHGYGLSVVLDIVLNHFGPEGNYLPLLAPAFFHKERMTPWGNGIAYDV---DAVRRYIIEAPLYWLTEYHLDGLRFDAIDQIEDSSARHVLVEIAQRIREDIT--DRPIHLTTEDSRNIISLHPRDQDGNAPLFTAEWNDDFHNAVHVFATGETQAYYNDFADAPEKHLARALAEGFAYQGEISPQTGEPRGVK-S-TGQPPVAFVDFIQNHDQVGNRAQGDRLITLAGAERTKVLLATLLLSPHIPLLFMGEEYGESRPFLFFTDFHG-DLARAVREGRAKEFADH--AGENVPDPNAPETFQRSKLNWKQQHSEEGKAWLAFTRELLLLRQKHIVPLLSAARESSGTVLQ----TAPGFIAVSWRFPGGTLSLALNISATTVLLPDL-----PGKTLFAWPNESTGSLSQHSLIVRLAQ--- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3M07.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -268818 for 4812 contacts (-55.9/contact) +
2D Compatibility (PS) -60272 + (NN) -35274 + (LL) 1360
1D Compatibility (HY) -35200 + (ID) 10700
Total energy: -408904.0 ( -84.98 by residue)
QMean score : 0.450
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