Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMNPLLILTFVAAALAAPFDDDDKIVGGYNCEENSVPYQVSLNSGYHFCGGSLINEQWVVSAGHCYKSRIQVRLGEHNIEVLEGNEQFINAAKIIRHPQYDRKTLNNDIMLIKLSSRAVINARVSTISLPTAPPATGTKCLISGWGNTASSGADYPDELQCLDAPVLSQAKCEASYPGKITSNMFCVGFLEGGKDSCQGDSGGPVVCNGQLQGVVSWGDGCAQKNKPGVYTKVYNYVKWIKNTIAANS
2TGD Chain:A ((8-229))------------------------VGGYTCGANTVPYQVSLNSGYHFCGGSLINSQWVVSAAHCYKSGIQVRLGEDNINVVEGNEQFISASKSIVHPSYNSNTLNNDIMLIKLKSAASLNSRVASISLPTSCASAGTQCLISGWGNTKSSGTSYPDVLKCLKAPILSDSSCKSAYPGQITSNMFCAGYLEGGKDSCQGDSGGPVVCSGKLQGIVSWGSGCAQKNKPGVYTKVCNYVSWIKQTIASN-


General information:
TITO was launched using:
RESULT:

Template: 2TGD.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -122065 for 1900 contacts (-64.2/contact) +
2D Compatibility (PS) -24215 + (NN) -10257 + (LL) 1920
1D Compatibility (HY) -28000 + (ID) 8300
Total energy: -190917.0 ( -100.48 by residue)
QMean score : 0.703

(partial model without unconserved sides chains):
PDB file : Tito_2TGD.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2TGD-query.scw
PDB file : Tito_Scwrl_2TGD.pdb: