Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MSHHWGYSKSNGPENWHKEFPIANGDRQSPVDIDTGTAQHDPSLQPLLIC-YDKVA--SKSIVNNGHSFNVEFDDSQDFAVLKEGPLSGSYRLIQFHFHWGSSDG-QGSEHTVNKKKYAAELHLVHWNT-KYGDFGKAVQHPDGLAVLGIFLKIGPASQGLQKITEALHSIKTKGKRAAFANFDPCSLLPGNL-DYWTYPGSLTTPPLLECVTWIVLKEPITVSSEQMSHFRKLNFNS--EGEAEELMVDNWRPAQPLKNRKIKASFK |
4HT2 Chain:A ((3-262)) | ---KWTYFGPDGENSWSKKYPSCGGLLQSPIDLHSDILQYDASLTPLEFQGYNLSANKQFLLTNNGHSVKLNLPSD---MHIQG--LQSRYSATQLHLHWGNPNDPHGSEHTVSGQHFAAELHIVHYNSDLYPDASTASNKSEGLAVLAVLIEMGSFNPSYDKIFSHLQHVKYKGQEAFVPGFNIEELLPERTAEYYRYRGSLTTPPCNPTVLWTVFRNPVQISQEQLLALETALYCTHMDDPSPREMINNFRQVQKFDERLVYTSFS |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 4HT2.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -111469 for 2034 contacts (-54.8/contact) +
2D Compatibility (PS) -26794 + (NN) -12580 + (LL) 88
1D Compatibility (HY) -18000 + (ID) 4400
Total energy: -173155.0 ( -85.13 by residue)
QMean score : 0.537
|
|
|