Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSVLQVLHIPDERLRKVAKPVEE-VNAEIQRIVDDMFETMYA------------EEGIGLAATQVDIHQRIIVIDVSENRDE--RLVLINPELLEKSGETG---IEEGCLSIPE-QRALVPRAEKVKIRALDRDGKPFELEADGLLAICIQHEMDHLVGKLFMDYLSPLKQQRIRQKVEKLDRLKARA
2OKL Chain:A ((3-174))
LTMKDVIREGDPILRNVAEEVSLPASEEDTTTLKEMIEFVINSQDPEMAEKYSLRPGIGLAAPQIGVSKKMIAVHVTDADGTLYSHALFNPKIISHSVERTYLQGGEGCLSVDREVPGYVPRYTRITVKATSINGEEVKLRLKGLPAIVFQHEIDHLNGVMFYDHINKENPF----------------
General information:
TITO was launched using:
RESULT:
Template:
2OKL.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -80028 for 1164 contacts (-68.8/contact) +
2D Compatibility (PS) -15652 + (NN) 1540 + (LL) 1776
1D Compatibility (HY) -11600 + (ID) 2400
Total energy: -106364.0 ( -91.38 by residue)
QMean score : 0.592
(partial model without unconserved sides chains):
PDB file :
Tito_2OKL.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2OKL-query.scw
PDB file :
Tito_Scwrl_2OKL.pdb
: