Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTIPAFHPGELNVYSAPGDVADVSRALRLTGRRVMLVPTMGALHEGHLALVRAAKRVPGSVVVVSIFVNPMQFGAGEDLDAYPRTPDDDLAQLRAEGVEIAFTPTTAAMYPDGL--RTTVQPGPLAAELEGGPRPTHFAGVLTVVLKLLQIVRPDRVFFGEKDYQQLVLIRQLVADFNLDVAVVGVPTVREADGLAMSSRNRYLDPAQRAAAVALSAALTAAAHAATAG---AQAALDAARAVLDAAPGVAVDYLELRDI-GLGPMP-LNGSGRLLVAARLGTTRLLDNIAIEIGTFAGTDRPDGYRAILESHWRN |
| 3Q12 Chain:A ((3-285)) | ---------AMLIIETLPLLRQQIRRWRQEGKRIALVPTMGNLHEGHMTLVDEAKT-RADVVVVTIFVNPLQFERPDDLAHYPRTLQEDCEKLTRHGADLVFAPAAADIYPAGLEKQTYVDVPALSTILEGASRPGHFRGVSTIVSKLFNLIQPDVACFGEKDYQQLALIRKMVADMGYDINIVGVPTVRAKDGLALSSRNGYLTEEERQIAPQLSKIMWALAEKMALGERQIDALLEEAAAQLLRVG-FTPDELFIRDAETLQPLTVDSQQAVILMAAWLGKARLIDNQLVDL---------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3Q12.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -173254 for 2281 contacts (-76.0/contact) +
2D Compatibility (PS) -31098 + (NN) -21947 + (LL) 1036
1D Compatibility (HY) -25200 + (ID) 6200
Total energy: -256663.0 ( -112.52 by residue)
QMean score : 0.683
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