Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MNKIIEIRAPKTLGGESITEGVIKIKKSIGEAIEVDDLIFEIETDKTALELTAEASGQITEFLVSEGDVISPDQLLAKLSVGEVKKEDKSENLAKRDAPSARKIMEENAISTESVKGTGMGSRITKADVIDHMRKAEQPTIKQYELPKSAASGERREERVKMSKIRQVIAARLKASQNTAAILTTFNEIDMKNVIDLRAKYKETFEKKYGIKLGFMSFFIKAAVQALREIPEINAEISGDEIIYKRYYDIGVAVGTNKGLVVPAIRNADQMSFAEIELTLADLGKKAREGKLQVSEMEDATFTISNGGVYGSLLSTPIINPPQSGILGMHSIQNRPFAVGNSIEIRPMMYIALSYDHRIIDGKGAVTFLVKIKNYIEDPNRLVLEV |
1SCZ Chain:A ((174-403)) | -----------------------------------------------------------------------------------------------------------------------------------------------------------SEKRVPMTRLRKRVAERLLEAKNSTAMLTTFNEVNMKPIMDLRKQYGEAFEKRHGIRLGFMSFYVKAVVEALKRYPEVNASIDGDDVVYHNYFDVSMAVSTPRGLVTPVLRDVDTLGMADIEKKIKELAVKGRDGKLTVEDLTGGNFTITNGGVFGSLMSTPIINPPQSAILGMHAIKDRPMAVNGQVEILPMMYLALSYDHRLIDGRESVGFLVTIKELLEDPTRLLLDV |
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General information:
TITO was launched using:
| RESULT:
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Template: 1SCZ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -116100 for 1703 contacts (-68.2/contact) +
2D Compatibility (PS) -25152 + (NN) -12714 + (LL) 10900
1D Compatibility (HY) -30400 + (ID) 6300
Total energy: -179766.0 ( -105.56 by residue)
QMean score : 0.450
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