Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MFITFEGIDGSGKTIQSELLANYFKQIHGENNMVLTREPGGTDFAEKVRGILLKDSIDPVSELLLLISMRYEHVKKVILPALKKGKIVICDRFIDSTIAYQGYGLGVDLELIRDLHKLVKI-KYPDTTFILDIDVQIGLSRAMDKNKYEEMNISFYNKVRKGFQEIAINEPDRCSIITEIEAKDNNQVHVEIVNKVTATKPVLLRK
2PBR Chain:A ((1-194))
MLIAFEGIDGSGKTTQAKKLYEYLKQKG--YFVSLYREPGGTKVGEVLREILLTEELDERTELLLFEASRSKLIEEKIIPDLKRDKVVILDRFVLSTIAYQGYGKGLDVEFIKNLNEFATRGVKPDITLLLDIPVDIALRRLKEKNRFE--NKEFLEKVRKGFLELAKEE-ENVVVIDA--SGEEEEVFKEILRALSGVLRV----
General information:
TITO was launched using:
RESULT:
Template:
2PBR.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -86431 for 1550 contacts (-55.8/contact) +
2D Compatibility (PS) -21350 + (NN) -16069 + (LL) 1056
1D Compatibility (HY) -16800 + (ID) 4350
Total energy: -143944.0 ( -92.87 by residue)
QMean score : 0.529
(partial model without unconserved sides chains):
PDB file :
Tito_2PBR.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2PBR-query.scw
PDB file :
Tito_Scwrl_2PBR.pdb
: