Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MPSVTFILPDGSKKSYEAAEGETLLNLAHRSDPDLLEGACEGSLACSTCHVIIDQNFYDAVETHNPISDEENDMLDLAFSLTETSRLGCQIKITKDIDGLCVTIPKGTRNISLDKQGND
2Y5C Chain:A ((5-108))
VVNVVFVDRSGQRIPVSGRVGDNVLHLAQRHGVD-LEGACEASLACSTCHVYVSEDHLDLLPP---PEEREDDMLDMAPLLQENSRLGCQIVLTPELEGAEFTLPKITR----------
General information:
TITO was launched using:
RESULT:
Template:
2Y5C.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -67801 for 792 contacts (-85.6/contact) +
2D Compatibility (PS) -11733 + (NN) -6660 + (LL) 228
1D Compatibility (HY) -9200 + (ID) 2300
Total energy: -97466.0 ( -123.06 by residue)
QMean score : 0.600
(partial model without unconserved sides chains):
PDB file :
Tito_2Y5C.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2Y5C-query.scw
PDB file :
Tito_Scwrl_2Y5C.pdb
: