Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNINNRIGIYPGTFDPITFGHIDIIKRACKLVDRLIIGVAENINKHTTFDAKLRTSMAENEIKRLEIDVDVVSFNGLLVKFAKEQNASVIIRGLRAVSDFDYEFQMSWVNYKLLPEIETIFLPASEDTQFISSSFVKEIARLGESVSKFVSVGVQKELINLNRIGSE
3RHS Chain:A ((4-152))
-------AVCPGSFDPVTLGHVDIFERAAAQFDEVVVAILVNPAKTGMFDLDERIAMVKESTTHLP-NLRVQVGHGLVVDFVRSCGMTAIVKGLRTGTDFEYELQMAQMN-KHIAGVDTFFVATAPRYSFVSSSLAKEVAMLGGDVSELLPEPVNRRLRDRLN----
General information:
TITO was launched using:
RESULT:
Template:
3RHS.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -99686 for 1163 contacts (-85.7/contact) +
2D Compatibility (PS) -15924 + (NN) -4766 + (LL) 992
1D Compatibility (HY) -12800 + (ID) 2600
Total energy: -134784.0 ( -115.89 by residue)
QMean score : 0.435
(partial model without unconserved sides chains):
PDB file :
Tito_3RHS.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3RHS-query.scw
PDB file :
Tito_Scwrl_3RHS.pdb
: