Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | -MYRYKPLLQSIHLPNGIKISNRFVLSPMTVNASTKEGYITKADLAYAARRSNSAGMQVTGAAYIEPYGKLFEYG-FNIDHDACIPGLTNMASTMKQHGSLAIIQLAHAGRFSNQAILNFGKVYGPS--PMTLHSPIEHVVIAMSHEKINSIIQQYRDATLRAIKAGFDGVEISIAQ-RLLIQTFFSTFSNRRTDHYGADSLKNRARLCLEVMRAVQEVIDKEAPDNFILGFRATPEETRGSDLGYTIDEFNQLIDWVMDVSNIQYLAIASWGRHIYQNTSRTPGDHFGRPVNQIVYEHLAGRIPLIASGGINSPESALDALQ--HADMVGMSSPFVTEPDFVHKLAEQRPHDINLEFSMADLEDLAIPHAAFKDIVKMMDYGEGLKKHTRDALRQLEQNYHDSSS-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
| 3K30 Chain:A ((7-690)) | VAAPYDVLFEPVQI-GPFTTKNRFYQVPHCNGMGYRD--PSAQASMRKIKAEGGWSAVCTEQVEIHATSDIAPFIELRIWDDQDLPALKRIADAIHEGGGLAGIELAHNGMNAPNQLSR-ETPLGPGHLPVAPDTIAPIQARAMTKQDIDDLRRWHRNAVRRSIEAGYDIVYVYGAHGYSGVHHFLSKRYNQRTDEYG-GSLENRMRLLRELLEDTLDECA----GRAAVACRITVEE--EIDGGITREDIEGVLRELGELPDLWDFAMGSWEGDS--VTSRFAPE--GRQEEFVAGLKKLTTKPVVGVGRFTSPDAMVRQIKAGILDLIGAARPSIADPFLPNKIRDGRLNLIR---ECIGCNICVSGDLTMSPIRCTQNPSMGEEWRRGWHPERIRAKESDARVLVVGAGPSGLEAARALGVRGYDVVLAEAGRDLGGRVTQESALPGLSAWGRVKEYREAVLAELPNVEIYRESPMTGDDIVEFGFEHVITATGATWRTDGVARFHTTALPIAEGMQVLGPDDLFAGRLPDGKKVVVYDDDHYYLGGVVAELLAQKGYEVSIVTPGAQVSSWTNNTFEVNRIQRRLIENGVARVTDHAVVAVGAGGVTVRDTYASIERELECDAVVMVTARLPREELYLDLVARRDAGEIASVRGIGDAWAPGTIAAAVWSGRRAAEEFDAVLPSNDEVPFRREVTQLA |
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General information:
TITO was launched using:
| RESULT:
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Template: 3K30.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -171380 for 3498 contacts (-49.0/contact) +
2D Compatibility (PS) -40780 + (NN) -17425 + (LL) 1180
1D Compatibility (HY) -5600 + (ID) 4000
Total energy: -238005.0 ( -68.04 by residue)
QMean score : 0.425
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