Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MERTFLMIKPDAVQRNLIGEVISRIERKGLKLVGGKLMQVPMELAETHYGEHQGKPFYNDLISFITSAPVFAMVVEGEDAVNVSRHIIGSTNPSEASPGSIRGDLGLTVGRNIIHGSDSLESAEREINLWFNENEITSYASPRDAWLYE
1B99 Chain:D ((9-155))
-ERTFLAVKPDGVARGLVGEIIARYEKKGFVLVGLKQLVPTKDLAESHYAEHKERPFFGGLVSFITSGPVVAMVFEGKGVVASARLMIGVTNPLASAPGSIRGDFGVDVGRNIIHGSDSVESANREIALWFKPEELLTEVKP-NPNLYE
General information:
TITO was launched using:
RESULT:
Template:
1B99.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -74366 for 1096 contacts (-67.9/contact) +
2D Compatibility (PS) -15819 + (NN) -4573 + (LL) 308
1D Compatibility (HY) -14400 + (ID) 4200
Total energy: -113050.0 ( -103.15 by residue)
QMean score : 0.556
(partial model without unconserved sides chains):
PDB file :
Tito_1B99.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1B99-query.scw
PDB file :
Tito_Scwrl_1B99.pdb
: