Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ------MAKLNMNNEIKKVEQRLEKAIKSKDSVLEQASLHLLSSGGKRVRPAFVILSSQFGKDEQTSEQTYQVAVALELIHMATLVHDDVIDKSDKRRGKLTISKKWDQTTAILTGNFLLALGLEHLMAVKDNRVHQLISESIVDVCRGELFQFQDQFNSQQTIINYLRRINRKTALLIQISTEVGAITSQSDKETVRKLKMIGHYIGMSFQIIDDVLDFTSTEKKLGKPVGSDLLNGHITLPILLEMRKNPDFKLKIEQLRRDSERKEFEECIQIIRKSDSIDEAKAVSSKYLSKALNLISELPDGHPKSLLLSLTKKMGSRNT |
| 3OYR Chain:A ((20-343)) | KSGSVDRLVRLAEADMAGVNRLITDRMQSDVAIIPALAEHLIAAGGKRLRPLMTVAAARLAG--ADNDHFQKLAAAVEFIHTATLLHDDVVVAAHL---------IWGGAQSVLVGDFLFARAFELMVETNSMKALEILARASRVIAEGEVLQLMRSHDLNLSQAVYLEIIQAKTAELFAAASEAGAVSAGVDVAKSEALRDYGLNLGLAFQLADDALDYA-------------------TLPLLLAIARSGP-REAEFWERAIGTEADFRRARELIIGSGALDATLDLAADYADKAKAALAMFPANDWREALEELADFAVSR-- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3OYR.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -127809 for 2397 contacts (-53.3/contact) +
2D Compatibility (PS) -31288 + (NN) -22329 + (LL) 1140
1D Compatibility (HY) -10800 + (ID) 3500
Total energy: -194586.0 ( -81.18 by residue)
QMean score : 0.564
|
|
|