Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MPKKSVRHIKIREIISNEQIETQDELVKRLNDYDLNVTQATVSRDIKELQLIKVPIPSGQYVYSLPNDRKFHPLEKLGRYLMDSFVNIDGTDNLLVLKTLPGNAQSIGAILDQIN-WEEVLGTICGDDTCLIICRSKEASDEIKSRIFNLL
1XXA Chain:A ((4-74))
--------------------------------------------------------------------------------LKNLVLDIDYNDAVVVIHTSPGAAQLIARLLDSLGKAEGILGTIAGDDTIFTTPANGFTVKDLYEAILELF
General information:
TITO was launched using:
RESULT:
Template:
1XXA.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -57178 for 486 contacts (-117.7/contact) +
2D Compatibility (PS) -7468 + (NN) -430 + (LL) 5740
1D Compatibility (HY) -6000 + (ID) 1200
Total energy: -66536.0 ( -136.91 by residue)
QMean score : 0.500
(partial model without unconserved sides chains):
PDB file :
Tito_1XXA.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1XXA-query.scw
PDB file :
Tito_Scwrl_1XXA.pdb
: