Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNIILMGLPGAGKGTQASEIVKKFPIPHISTGDMFRKAIKEETELGKEAKSYMDRGELVPDEVTVGIVKERISEDDAKKGFLLDGFPRTIEQAEALNNIMSELDRNIDAVINIEVPEEELMNRLTGRRICESCGTTYHLVFNPPKVEGICDIDGGKLYQREDDNPETVANRLSVNIKQSKPILDFYDQKGVLKNIDGSKDISDVTKDVIDILDHL
4CF7 Chain:B ((1-202))
MILVFLGPPGAGKGTQAKRLAKEKGFVHISTGDILREAVQKGTPLGKKAKEYMERGELVPDDLIIALIEEVFPKHG---NVIFDGFPRTVKQAEALDEMLEKKGLKVDHVLLFEVPDEVVIERLSGRRINPETGEVYHVKYNPPP-------PGVKVIQREDDKPEVIKKRLEVYREQTAPLIEYYKKKGILRIIDASKPVEEVYRQVLEVI---
General information:
TITO was launched using:
RESULT:
Template:
4CF7.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -71164 for 1579 contacts (-45.1/contact) +
2D Compatibility (PS) -21835 + (NN) -12702 + (LL) 928
1D Compatibility (HY) -20400 + (ID) 4450
Total energy: -129623.0 ( -82.09 by residue)
QMean score : 0.491
(partial model without unconserved sides chains):
PDB file :
Tito_4CF7.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4CF7-query.scw
PDB file :
Tito_Scwrl_4CF7.pdb
: