Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKTFGKKVVLIGDGSVGSSYAFAMVTQGVADEFVIIDIAKDKVKADVQDLNHGTVHSPSPVDVKAGEYEDCKDADLVVITAGAPQKPGETRLQLVEKNTKIMKSIVKSVMDSGFDGYFLIAANPVDILTRFVKEYTGLPAERVIGSGTVLDSARLQYLISQELGVAPSSVDASIIGEHGDTELAVWSQANVAGISVYD--TLKEQTGSEA-KAEEIYVNTRDAAYEIIQAKGSTYYGIALALMRISKAILNNENNVLNVSIQLDGQYGGHKGVYLGVPTLVNQHGAVKIYEMPLSAEEQALFDKSVKILEDTFDSIKYLLED
1LTH Chain:T ((9-313))------KLAVIGAGAVGSTLAFAAAQRGIAREIVLEDIAKERVEAEVLDMQHGSSFYPTVSIDGSDDPEICRDADMVVITAGPRQKPGQSRLELVGATVNILKAIMPNLVKVAPNAIYMLITNPVDIATHVAQKLTGLPENQIFGSGTNLDSARLRFLIAQQTGVNVKNVHAYIAGEHGDSEVPLWESATIGGVPMSDWTPLPGHDPLDADKREEIHQEVKNAAYKIINGKGATNYAIGMSGVDIIEAVLHDTNRILPVSSMLK-DFHGISDICMSVPTLLNRQGVNNTINTPVSDKELAALKRSAETLKET----------


General information:
TITO was launched using:
RESULT:

Template: 1LTH.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -188488 for 2636 contacts (-71.5/contact) +
2D Compatibility (PS) -32779 + (NN) -14766 + (LL) 944
1D Compatibility (HY) -21600 + (ID) 6150
Total energy: -262839.0 ( -99.71 by residue)
QMean score : 0.550

(partial model without unconserved sides chains):
PDB file : Tito_1LTH.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1LTH-query.scw
PDB file : Tito_Scwrl_1LTH.pdb: