Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | --------MLYSLVKKYLFSLDAEIAHEKVCQILRTLSSSPFLCRLIHSQWGYKNPKLENEILGLNFPNPLGLAAGF-DKNASMLRALIAFG-FGYLEAGTLTNIA-QSGNEKPRLFRHIEEESLQ----NAMGFNNYGAILGV-------RAFNRFAPYKTPIGINLGKNKHIEQAHALEDYQAVLNQCLNIG-DYYTFNLSSPNTPN-LRDLQNKVFVNELFCMAKEMTHK---PLFLKIAPDLEIDSMLEVVNSAIEAGANGIIATNTTIDKSLVFAPK--------EMGGLSGKCLTKKSREIFKELAKAFFNKSVLVSVGGISDAKEAYERIKMGASLLQIYSAFIYKGPNLCQNILKDLVKLLQKDGFLSVKEAIGADLR- |
| 1D3G Chain:A ((1-367)) | MATGDERFYAEHLMPTLQGLLDPESAHRLAVRFTSLGLLPF-----------QDSDMLEVRVLGHKFRNPVGIAAG-FDKHGEAVDGLYKM-GFGFVEIGSVTPK-PQEGNPRPRVFRLPED----QAVINRYGFNSHGLSVVEHRLRARQQKQAKLTEDGLPLGVNLGKNK--TSVDAAEDYAEGVRVLGPL-ADYLVVNVSSPNTA-GLGKAELRRLLTKVLQERDGLRRVHRPAVLVKIAPDLTSQDKEDIASVVKELGIDGLIVTNTTV-SRPA----GLQGALRSETGGLSGKPLRDLSTQTIREMYALTQGRVPIIGVGGVSSGQDALEKIRAGASLVQLYTALTFWGPPVVGKVKRELEALLKEQGFGGVTDAIGADHRR |
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General information:
TITO was launched using:
| RESULT:
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Template: 1D3G.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -131371 for 2856 contacts (-46.0/contact) +
2D Compatibility (PS) -34892 + (NN) -16372 + (LL) 1560
1D Compatibility (HY) -13600 + (ID) 5550
Total energy: -200225.0 ( -70.11 by residue)
QMean score : 0.453
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