Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MSNPNLSFYCNECERFESFLKNHYLHLEGFHPYLEKAFFEMVLNGGKRFRPKLFLAVLCSLVGKKDYSNQQTEYFKIALSIECLHTYSLIHDDLPCMDNAILRRNHPTLHAKYDETTAVLIGDALNTYSFELLSNSLLE---SRIIVELVKILSANGGIKGMILGQALDCYFENT---PLNLEQLTFLHEHKTAKLISASLIMGLVASGINDEELLKWLQAFGLKMGLCFQVLDDIIDVTQDEKESGKTTHLDSAKNSFVNLLGLKKASGYAQTLKTEILNDLNALEPTYLSLQENLNALLNTLFKGKT |
2J1P Chain:A ((14-289)) | -----ISYIIRKADSVNKALDSAVPLR-E-PLKIHEAMRYSLLAGGKRVRPVLCIAACELVGGEE------SLAMPAACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVYGEDVAVLAGDALLSFAFEHLASATSSEVSPARVVRAVGELAKAIGTEGLVAGQVVDIS---LDLNNVGLEHLKFIHLHKTAALLEASAVLGGIIGG-GSDEEIERLRKFARCIGLLFQVVDDILDVTK--------------KLTYPKLMGLEKSREFAEKLNTEARDQLLGFDSDK---VAPLLALANYIANRQN |
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General information:
TITO was launched using:
| RESULT:
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Template: 2J1P.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -190542 for 2229 contacts (-85.5/contact) +
2D Compatibility (PS) -28333 + (NN) -17063 + (LL) 1372
1D Compatibility (HY) -16800 + (ID) 4850
Total energy: -256216.0 ( -114.95 by residue)
QMean score : 0.474
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