Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MAEKTANDLKLSEIELVDFRIYGMQEGVPYEGIYGINVAKVQEIIPMPTLFEYPTNLDYIIGVFDLRSTIIPLIDLAKWIGIVPDKSKENERIVIITEFNNVKMGFLVHSARRIRRISWKDVEPASFSASNSINKENITGTTRIENDKTLLILDLESILDDLKLNEDAKSTKEDTPKERFEGEVLFLDDSRTARKTLKNHLSKLGFS-ITEAVDGEDGLNKLEMLFKKYGDDLRKHLKFIISDVEMPKMDGYHFLFKLQKDPRFAYIPVIFNSSICDNYSAERAKEMGAVAYLVK-FDAEKFTEEISKILDKNA |
3OO1 Chain:A ((9-126)) | ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LVVDDFSTMRRIVRNLLKELGFNNVEEAEDGVDALNKLQA--GGYG--------FVISDWNMPNMDGLELLKTIRADGAMSALPVLMVTAEAKKENIIAAAQAGASGYVVKPFTPATLEEKLNKIFEKLG |
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General information:
TITO was launched using:
| RESULT:
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Template: 3OO1.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -59200 for 871 contacts (-68.0/contact) +
2D Compatibility (PS) -12398 + (NN) -5928 + (LL) 13864
1D Compatibility (HY) -10000 + (ID) 2250
Total energy: -75912.0 ( -87.15 by residue)
QMean score : 0.666
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